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The Plant Genome - First Look

 

First look articles are posted immediately following acceptance to provide faster publication and better access to the newest research.
These articles are posted prior to technical editing, author proofing, and formatting.

The article should be cited as follows:
Author. Year. Article title. Journal name doi: XX.XXXX/XXXXX.


POPULATION GENOMICS RELATED TO ADAPTATION IN ELITE OAT GERMPLASM.
Kathy Esvelt Klos; Yung-Fen Huang; Wubishet Bekele; Don Obert; Ebraheim Babiker; Aaron Beattie; Åsmund Bjørnstad; J. Bonman; Martin Carson; Shiaoman Chao; Belaghihalli Gnanesh; Irene Griffiths; Stephen Harrison; Catherine Howarth; Gongshe Hu; Amir Ibrahim; Emir Islamovic; Eric Jackson; Jean-Luc Jannink; Fred Kolb; Michael S. McMullen; Jennifer Mitchell Fetch; Joseph Murphy; Herbert Ohm; Howard Rines; Brian Rossnagel; Jessica Schlueter; Mark Sorrells; Charlene Wight; Weikai Yan; Nicholas Tinker
doi: 10.3835/plantgenome2015.10.0103; Date posted: February 04, 2016
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DEVELOPMENT OF A HIGH-DENSITY LINKAGE MAP AND TAGGING LEAF SPOT RESISTANCE IN PEARL MILLET USING GBS MARKERS
Somashekhar Punnuri; Jason Wallace; Joseph Knoll; Katie Hyma; Sharon Mitchell; Edward Buckler; Rajeev Varshney; Bharat Singh
doi: 10.3835/plantgenome2015.10.0106; Date posted: February 01, 2016
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A CONSENSUS MAP IN CULTIVATED HEXAPLOID OAT REVEALS CONSERVED GRASS SYNTENY WITH SUBSTANTIAL SUB-GENOME REARRANGEMENT
Ashley Chaffin; Yung-Fen Huang; Scott Smith; Wubishet Bekele; Ebraheim Babiker; Belaghihalli Gnanesh; Bradley Foresman; Stephen Blanchard; Jeremy Jay; Robert Reid; Charlene Wight; Shiaoman Chao; Rebekah Oliver; Emir Islamovic; Fred Kolb; Curt McCartney; Jennifer Mitchell Fetch; Aaron Beattie; Åsmund Bjørnstad; J. Bonman; Tim Langdon; Catherine Howarth; Cory Brouwer; Eric Jellen; Kathy Esvelt Klos; Jesse Poland; Tzung-Fu Hsieh; Ryan Brown; Eric Jackson; Jessica Schlueter; Nicholas Tinker
doi: 10.3835/plantgenome2015.10.0102; Date posted: January 25, 2016
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IDENTIFICATION AND VALIDATION OF CANDIDATE GENES ASSOCIATED WITH DOMESTICATED AND IMPROVED TRAITS IN SOYBEAN
Ling Zhou; Longhai Luo; Jian-Fang Zuo; Linfeng Yang; Li Zhang; Xuanmin Guang; Yuan Niu; Jianbo Jian; Qing-Chun Geng; Liping Liang; Qijian Song; M Dunwell Jim; Zhenzhen Wu; Jia Wen; Yu-Qin Liu; Yuan-Ming Zhang
doi: 10.3835/plantgenome2015.09.0090; Date posted: January 25, 2016
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FERTILIZATION OF GRAPEVINE BASED ON GENE EXPRESSION
Cheng Zhang; Haifeng Jia; Jingjue Zeng; Tariq Pervaiz; Zhenqiang Xie; Xudong Zhu; Chen Wang
doi: 10.3835/plantgenome2015.09.0083; Date posted: January 14, 2016
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GAPIT VERSION 2: ENHANCED INTEGRATED TOOL FOR GENOMIC ASSOCIATION AND PREDICTION
You Tang; Xiaolei Liu; Jiabo Wang; Meng Li; Qishan Wang; Feng Tian; Zhongbin Su; Yuchun Pan; Di Liu; Alexander Lipka; Edward Buckler; Zhiwu Zhang
doi: 10.3835/plantgenome2015.11.0120; Date posted: January 14, 2016
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SYMPTOM CHARACTERISTICS, BINDING ACTIVITY, AND EXPRESSION PROFILES: NOVEL INSIGHTS INTO AP2/ERF TRANSCRIPTION FACTORS INVOLVED IN RESPONSE TO TYLCV IN TOMATO
Ying Huang; Bao-Long Zhang; Sheng Sun; Guo-Ming Xing; Feng Wang; Meng-Yao Li; Yong-Sheng Tian; Aisheng Xiong
doi: 10.3835/plantgenome2015.09.0082; Date posted: January 06, 2016
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POPULATION STRUCTURE IN THE MODEL GRASS BRACHYPODIUM DISTACHYON IS HIGHLY CORRELATED WITH FLOWERING DIFFERENCES ACROSS BROAD GEOGRAPHIC AREAS
Ludmila Tyler; Scott Lee; Nelson Young; Gregory DeIulio; Elena Benavente; Michael Reagon; Jessica Sysopha; Riccardo Baldini; Angelo Troìa; Samuel Hazen; Ana Caicedo
doi: 10.3835/plantgenome2015.08.0074; Date posted: January 06, 2016
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THE TRITICEAE TOOLBOX: COMBINING PHENOTYPE AND GENOTYPE DATA TO ADVANCE SMALL-GRAINS BREEDING
Victoria Blake; Clayton Birkett; David Matthews; David Hane; Peter Bradbury; Jean-Luc Jannink
doi: 10.3835/plantgenome2014.12.0099; Date posted: December 18, 2015
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GENOME-WIDE ASSOCIATION STUDY OF BROWN STEM ROT RESISTANCE IN SOYBEAN ACROSS MULTIPLE POPULATIONS
Keith Rincker; Alexander Lipka; Brian Diers
doi: 10.3835/plantgenome2015.08.0064; Date posted: December 17, 2015
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DE NOVO TRANSCRIPTOME ASSEMBLY AND DYNAMIC SPATIAL GENE EXPRESSION ANALYSIS IN RED CLOVER (TRIFOLIUM PRATENSE)
Manohar Chakrabarti; Randy Dinkins; Arthur Hunt
doi: 10.3835/plantgenome2015.06.0048; Date posted: December 15, 2015
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ASSESSMENT OF CULTIVAR DISTINCTNESS IN ALFALFA: A COMPARISON OF GENOTYPING-BY-SEQUENCING, SSR MARKER AND MORPHOPHYSIOLOGICAL OBSERVATIONS
Paolo Annicchiarico; Nelson Nazzicari; Ananta Acharya; Maria Carelli; Yanling Wei; Edward Brummer
doi: 10.3835/plantgenome2015.10.0105; Date posted: December 07, 2015
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DISSECTING THE GENETIC BASIS OF RESISTANCE TO SOYBEAN CYST NEMATODE COMBINING LINKAGE AND ASSOCIATION MAPPING
Li-juan Qiu; Ying-hui Li; Xue-hui Shi; Huihui Li; Jochen Reif; Jia-jun Wang; Zhang-xiong Liu; Sang He; Bai-shuang Yu
doi: 10.3835/plantgenome2015.04.0020; Date posted: December 07, 2015
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GENOME-WIDE ASSOCIATION STUDIES OF GRAIN YIELD COMPONENTS IN DIVERSE SORGHUM GERMPLASM
Richard Boyles; Elizabeth Cooper; Matthew Myers; Zachary Brenton; Bradley Rauh; Geoffrey Morris; Stephen Kresovich
doi: 10.3835/plantgenome2015.09.0091; Date posted: December 04, 2015
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GENOME-WIDE ASSOCIATION STUDY FOR NINE PLANT ARCHITECTURE TRAITS IN SORGHUM BICOLOR
Jing Zhao; Maria Mantilla Perez; Jieyun Hu; Maria Salas Fernandez
doi: 10.3835/plantgenome2015.06.0044; Date posted: December 04, 2015
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SOFTWARE FOR GENOME-WIDE ASSOCIATION STUDIES IN AUTOPOLYPLOIDS AND ITS APPLICATION TO POTATO
Umesh Rosyara; Walter DeJong; David Douches; Jeffrey Endelman
doi: 10.3835/plantgenome2015.08.0073; Date posted: December 03, 2015
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FINE MAPPING OF TWO WHEAT POWDERY MILDEW RESISTANCE GENES LOCATED AT THE PM1 CLUSTER
Junchao Liang; Bisheng Fu; Wenbin Tang; Nasr Khan; Nasr Li; Zhengqiang Ma
doi: 10.3835/plantgenome2015.09.0084; Date posted: December 01, 2015
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A HIGH DENSITY LINKAGE MAP OF THE ANCESTRAL DIPLOID STRAWBERRY, F. IINUMAE, USING SNP MARKERS FROM THE ISTRAW90 ARRAY AND GBS
Lise Mahoney; Daniel Sargent; Dave Wood; Feseha Abebe-Akele; Judson Ward; Bassil Nahla; James Hancock; Kevin Folta; Thomas Davis
doi: 10.3835/plantgenome2015.08.0071; Date posted: December 01, 2015
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GENOME-WIDE IDENTIFICATION OF THE AP2/ERF GENE FAMILY INVOLVED IN ACTIVE CONSTITUENT BIOSYNTHESIS IN SALVIA MILTIORRHIZA
Aijia Ji; Hongmei Luo; Zhichao Xu; Xin Zhang; Yingjie Zhu; Baosheng Liao; Hui Yao; Jingyuan Song; Shilin Chen
doi: 10.3835/plantgenome2015.08.0077; Date posted: November 24, 2015
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GENOTYPING-BY-SEQUENCING ON POOLED SAMPLES (POOL-GBS) AND ITS USE IN MEASURING SEGREGATION BIAS DURING THE COURSE OF ANDROGENESIS IN BARLEY
Sébastien Bélanger; Patricio Esteves; Isabelle Clermont; Martine Jean; Francois Belzile
doi: 10.3835/plantgenome2014.10.0073; Date posted: November 10, 2015
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